Ohhhh.... so your powering the HifiBerry DAC separately to the Pi.... or powering the Pi via the power to the DAC?
Edit: I checked again.... You are... this is the better option. So sound wise, it is better yes? No? Than powering the DAC via the Pi's micro USB? What about powering the Pi and the DAC separately to each other... have you tried that? Both having separate power supplies?
I've thought of this with my DAC (PiFi)... how to power it separately to the Pi's power. It is, as I understand, better to isolate the power supply from the Pi's power supply.